Technical
Information |
Procedure for
Preparation
of Cationic Lipid/Oligomer Complex |
Rationale:
Normal procedure for preparation of lipid:DNA complex
requires suspending the cationic lipid in aqueous buffer
and sonication to form small vesicles. The cationic
lipid vesicles are mixed with the aqueous DNA solution
at a weight ratio of 10:1, lipid:DNA, and incubated
for a period of time. During this incubation it is presumed
that the positively charged liposomes associate and
coat the surface of the DNA, giving the DNA a cationic
lipid layer which facilitates interaction with and tranfer
through the cell membrane. With small DNA fragments
or oligomers such as antisense DNA, the DNA particle
is typically much smaller than the lipid particle. In
this case, the lipid does not coat the DNA, but rather
the DNA coats the surface of the liposome. This would
serve to disrupt the critical liposome:cell surface
interaction and inhibit transfer through the membrane.
To effectively coat these small DNA particles, the lipid
needs to be presented to the DNA in its monomer (or
small aggregate) form. This can be accomplished by dissolving
the lipid in an organic solvent and either dispersing
the organic in an aqueous solution of the DNA, or incubating
the lipid and DNA together in the organic solvent. The
solvent of choice is ethanol since it is both miscible
with water and non-toxic to biological systems in the
event that residual solvent remains in the suspension.
Procedure A
(ethanol lipid solution:aqueous oligomer solution)
- Dissolve cationic lipid in ethanol. If the lipid
sample is stored in chloroform, evaporate the chloroform
using dry nitrogen or argon and place lipid residue
on a vacuum system for 1 hour to remove residual chloroform.
Add ethanol to dry lipid residue and dissolve completely
using moderate heat (40-50°C) and sonication
if necessary. Adjust the concentration such that the
volume of ethanol lipid solution added to aqueous
oligomer solution is 10% of the aqueous solution volume.
- Dissolve oligomer in a suitable volume of aqueous
buffer.
- Add ethanol lipid solution to the aqueous oligomer
solution at a weight ratio of 10:1, lipid:oligomer.
Thoroughly mix the lipid:oligomer suspension by vortexing
or sonication. Incubate the suspension for 5-10 minutes
to allow lipid:oligomer complex to form. If residual
ethanol is not desired, heat the suspension to 40-50°C
and bubble nitrogen through the suspension until ethanol
is removed.
Procedure B
(ethanol lipid solution:ethanol oligomer solution)
- Dissolve cationic lipid in ethanol. If the lipid
sample is stored in chloroform, evaporate the chloroform
using dry nitrogen or argon and place lipid residue
on a vacuum system for 1 hour to remove residual chloroform.
Add ethanol to dry lipid residue and dissolve completely
using moderate heat (40-50°C) and sonication
if necessary.
- Dissolve oligomer in a suitable volume of ethanol.
- Combine the ethanol solutions in a weight ratio
of 10:1, lipid:oligomer. Thoroughly mix the lipid:oligomer
suspension by vortexing or sonication. Incubate the
suspension for 5-10 minutes to allow lipid:oligomer
complex to form. Evaporate the ethanol using dry nitrogen,
argon, rotory evaporator, etc., and dry the lipid
residue on a vacuum system for 1 hour to remove residual
ethanol.
- Resuspend lipid:oligomer complex in aqueous buffer
and sonicate to disperse.
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